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  1. General Info
  2. Source Info
  3. Effects Info
  4. Reference
Phytochemical Details
01. General Information
Name Berbamine
PubChem CID 275182
Molecular Weight 608.7g/mol
Synonyms

(+)-berbamine, 16h-1,24:6,9-dietheno-11,15-metheno-2H-pyrido(2',3':17,18)(1,11)dioxacycloeicosino(2,3,4-ij)isoquinolin-12-ol, 3,4,4a,5,16a,17,18,19-octahydro-21,22,26-trimethoxy-4,17-dimethyl-, (4aS,16aR)-, 16h-1,24:6,9-dietheno-11,15-metheno-2H-pyrido(2',3':17,18)(1,11)dioxacycloeicosino(2,3,4-ij)isoquinolin-12-ol, 3,4,4a,5,16a,17,18,19-octahydro-21,22,26-trimethoxy-4,17-dimethyl-, (4aS-(4aR*,16aS*))-, 16H-1,24:6,9-dietheno-11,15-metheno-2H-pyrido(2',3':17,18)(1,11)dioxacycloeicosino(2,3,4-ij)isoquinolin-12-ol, 3,4,4a,5,16a,17,18,19-octahydro-21,22,26-trimethoxy-4,17-dimethyl-, hydrochloride (1:2), (4aS,16aR)-, 16H-1,24:6,9-dietheno-11,15-metheno-2H-pyrido(2',3':17,18)(1,11)dioxacycloeicosino(2,3,4-ij)isoquinolin-12-ol, 3,4,4a,5,16a,17,18,19-octahydro-21,22,26-trimethoxy-4,17-dimethyl-, hydrochloride, hydrate (1:1:4), (4aS,16aR)-, 6,6',7-trimethoxy-2,2'-dimethylberbaman-12-ol, berbaman-12-ol, 6,6',7-trimethoxy-2,2'-dimethyl-, berbaman-12-ol, 6,6',7-trimethoxy-2,2'-dimethyl-, dihydrochloride, berbamine, berbamine dihydrochloride, berbamine hydrochloride, berbamine hydrochloride tetrahydrate, berbamine monohydrochloride, berbamine, (+), berbamine, (1'beta)-isomer, berbamine, (1beta)-isomer, berbamine, monohydrochloride, tetrahydrate, D-berbamine, penduline, pycnamine

Formula C₃₇H₄₀N₂O₆
SMILES CN1CCC2=CC(=C3C=C2C1CC4=CC=C(C=C4)OC5=C(C=CC(=C5)CC6C7=C(O3)C(=C(C=C7CCN6C)OC)OC)O)OC
InChI 1S/C37H40N2O6/c1-38-14-12-24-19-32(41-3)33-21-27(24)28(38)16-22-6-9-26(10-7-22)44-31-18-23(8-11-30(31)40)17-29-35-25(13-15-39(29)2)20-34(42-4)36(43-5)37(35)45-33/h6-11,18-21,28-29,40H,12-17H2,1-5H3/t28-,29+/m0/s1
InChIKey DFOCUWZXJBAUSQ-URLMMPGGSA-N
CAS Number 478-61-5
ChEMBL ID CHEMBL504323
ChEBI ID CHEBI:3063
Herb ID HBIN017888
Drug Bank ID DB18146
KEGG ID C09357
Toxicity Organism Test Type Route(Dose)
rat LD50 intraperitoneal(165 mg/kg)
mouse LD50 intraperitoneal(254 mg/kg)
rat LD50 oral(322 mg/kg)
Structure 2D-img
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2D MOL 3D MOL
02. Source Information of Phytochemical
(1) Stephania cep-hurantha Havata Cool
Chineses Pinyin BaiYaoZi
Use Part Tuberoid
Habitat JiangSu, AnHui, ZheJiang, JiangXi, FuJian, TaiWan, HuNan, GuangDong, GuangXi, GuiZhou
Flavor Bitter, Pungent
Meridian Tropism Lung, Stomach
(2) Aristolochia fangchi Cold
Chineses Pinyin GuangFangJi
Use Part Root
Habitat GuangDong, GuangXi
Flavor Bitter, Pungent
Meridian Tropism Bladder, Lung
Species
>Kingdom: Viridiplantae
 -->Phylum: Streptophyta
  -->Class: Equisetopsida
   -->Order: Piperales
    -->Family: Aristolochiaceae
     -->Genus: Aristolochia
      -->Species: Aristolochia fangchi
(3) Coptis chinensis Cold
Chineses Pinyin HuangLian
Use Part Rhizome
Habitat SiChuan, YunNan, HuBei
Flavor Bitter
Meridian Tropism Heart, Spleen, Stomach, Liver, Gallbladder, Large intestine
Species
>Kingdom: Viridiplantae
 -->Phylum: Streptophyta
  -->Class: Equisetopsida
   -->Order: Ranunculales
    -->Family: Ranunculaceae
     -->Genus: Coptis
      -->Species: Coptis chinensis
(4) Mahonia bealei Cold
Chineses Pinyin GongLaoMu
Use Part Stem
Habitat Shaanxi, AnHui, HuBei, HuNan, ZheJiang
Flavor Bitter
Meridian Tropism Liver, Stomach, Large intestine
Species
>Kingdom: Viridiplantae
 -->Phylum: Streptophyta
  -->Class: Equisetopsida
   -->Order: Ranunculales
    -->Family: Berberidaceae
     -->Genus: Berberis
      -->Species: Berberis bealei
(5) Thalictrum petaloideum Cold
Chineses Pinyin BanRuiTangSongCao
Use Part Root, Rhizome
Habitat HeiLongJiang, JiLin, LiaoNing, BeiJing, TianJin, HeBei, ShanXi, NeiMengGu, Shaanxi, NingXia, GanSu, QingHai, AnHui, HeNan, SiChuan
Flavor Bitter
Meridian Tropism Liver, Stomach, Large intestine
Species
>Kingdom: Viridiplantae
 -->Phylum: Streptophyta
  -->Class: Equisetopsida
   -->Order: Ranunculales
    -->Family: Ranunculaceae
     -->Genus: Thalictrum
      -->Species: Thalictrum petaloideum
(6) Thalictrum faberi Ulbr Cold
Chineses Pinyin DaYeTangSongCao
Use Part Root, Rhizome
Habitat ZheJiang, JiangSu, AnHui, JiangXi, HuNan, HeNan
Flavor Bitter
Meridian Tropism Large intestine, Liver
Species
>Kingdom: Viridiplantae
 -->Phylum: Streptophyta
  -->Class: Equisetopsida
   -->Order: Ranunculales
    -->Family: Ranunculaceae
     -->Genus: Thalictrum
      -->Species: Thalictrum faberi
(7) Ilex cornute Cool
Chineses Pinyin HuaNanGongLaoYe
Use Part Leaf
Habitat GanSu, Shaanxi, JiangSu, AnHui, ZheJiang, JiangXi, HeNan, HuBei, HuNan, GuangDong, GuangXi, SiChuan
Flavor Bitter
Meridian Tropism Liver, Kidney
(8) Thalictrum glandulosissimum Cold
Chineses Pinyin JinSiMaWeiLian
Use Part Rhizome And Root
Habitat YunNan
Flavor Bitter
Meridian Tropism Heart, Liver, Gallbladder, Large intestine
Species
>Kingdom: Viridiplantae
 -->Phylum: Streptophyta
  -->Class: Equisetopsida
   -->Order: Ranunculales
    -->Family: Ranunculaceae
     -->Genus: Thalictrum
      -->Species: Thalictrum glandulosissimum
(9) Stephania cepharantha Cold
Chineses Pinyin JinXianDiaoWuGui
Use Part Root Tuber
Habitat Shaanxi, GanSu, QingHai, NingXia, XinJiang, ZheJiang, JiangSu, TaiWan, SiChuan, GuiZhou, YunNan, XiZang, ChongQing, BeiJing, TianJin, ShanDong, JiangSu, ShangHai, GuangDong, HaiNan, FuJian, Hongkong
Flavor Bitter
(10) Thalictrum foliolosum Cold
Chineses Pinyin MaWeiLian
Use Part Root, Rhizome
Habitat China
Flavor Bitter
Meridian Tropism Heart, Lung, Liver, Gallbladder, Large intestine
Species
>Kingdom: Viridiplantae
 -->Phylum: Streptophyta
  -->Class: Equisetopsida
   -->Order: Ranunculales
    -->Family: Ranunculaceae
     -->Genus: Thalictrum
      -->Species: Thalictrum foliolosum
(11) Berberis thunbergii Unknown
Chineses Pinyin RiBenXiaoBo
Use Part Root, Root Cortex, Stem-Leaf
Habitat Japan
Species
>Kingdom: Viridiplantae
 -->Phylum: Streptophyta
  -->Class: Equisetopsida
   -->Order: Ranunculales
    -->Family: Berberidaceae
     -->Genus: Berberis
      -->Species: Berberis thunbergii
(12) Berberis potaninii Unknown
Chineses Pinyin ShaoChiXiaoBo
Habitat Shaanxi, GanSu, SiChuan
Species
>Kingdom: Viridiplantae
 -->Phylum: Streptophyta
  -->Class: Equisetopsida
   -->Order: Ranunculales
    -->Family: Berberidaceae
     -->Genus: Berberis
      -->Species: Berberis potaninii
(13) Stephania sasakii Even
Chineses Pinyin TaiWanQianJinTeng
Use Part Rhizome
Habitat TaiWan
Flavor Sweet
Meridian Tropism Liver, Stomach
Species
>Kingdom: Viridiplantae
 -->Phylum: Streptophyta
  -->Class: Equisetopsida
   -->Order: Ranunculales
    -->Family: Menispermaceae
     -->Genus: Stephania
      -->Species: Stephania sasakii
(14) Ilex cornuta Cool
Chineses Pinyin XiYeGongLaoYe
Use Part Leaf
Habitat HeNan, HuBei, AnHui, JiangSu, ZheJiang, AnHui, SiChuan, Shaanxi
Flavor Bitter
Meridian Tropism Liver, Kidney
Species
>Kingdom: Viridiplantae
 -->Phylum: Streptophyta
  -->Class: Equisetopsida
   -->Order: Aquifoliales
    -->Family: Aquifoliaceae
     -->Genus: Ilex
      -->Species: Ilex cornuta
(15) Thalictrum atriplex Cold
Chineses Pinyin XiaXuTangSongCao
Use Part Rhizome, Root
Habitat XiZang, YunNan, SiChuan
Flavor Bitter
Species
>Kingdom: Viridiplantae
 -->Phylum: Streptophyta
  -->Class: Equisetopsida
   -->Order: Ranunculales
    -->Family: Ranunculaceae
     -->Genus: Thalictrum
      -->Species: Thalictrum atriplex
(16) Berberis diaphana Unknown
Chineses Pinyin XianHuangXiaoBo
Use Part Endoderm Root Bark, Branch Bark
Habitat Shaanxi, GanSu, QingHai
Species
>Kingdom: Viridiplantae
 -->Phylum: Streptophyta
  -->Class: Equisetopsida
   -->Order: Ranunculales
    -->Family: Berberidaceae
     -->Genus: Berberis
      -->Species: Berberis diaphana
(17) Thalictrum microgynum Cool
Chineses Pinyin XiaoGuoTangSongCao
Use Part Root
Habitat YunNan
Flavor Bitter
Meridian Tropism Lung, Liver, Gallbladder
Species
>Kingdom: Viridiplantae
 -->Phylum: Streptophyta
  -->Class: Equisetopsida
   -->Order: Ranunculales
    -->Family: Ranunculaceae
     -->Genus: Thalictrum
      -->Species: Thalictrum microgynum
(18) Thalictrum minus Cold
Chineses Pinyin YanGuoCao
Use Part Root
Habitat GuiZhou, HuBei, SiChuan, GanSu, Shaanxi, BeiJing, TianJin, HeBei, ShanXi, NeiMengGu, HeiLongJiang, JiLin, LiaoNing
Flavor Bitter
Meridian Tropism Lung, Stomach
Species
>Kingdom: Viridiplantae
 -->Phylum: Streptophyta
  -->Class: Equisetopsida
   -->Order: Ranunculales
    -->Family: Ranunculaceae
     -->Genus: Thalictrum
      -->Species: Thalictrum minus
(19) Thalictrum simplex Cold
Chineses Pinyin YingShuiHuangLian
Use Part Root, Whole Herb
Habitat JiLin, LiaoNing, HeiLongJiang, ShanXi, GanSu, QingHai, SiChuan, HuBei, NeiMengGu
Flavor Bitter
Meridian Tropism Liver, Lung, Large intestine
Species
>Kingdom: Viridiplantae
 -->Phylum: Streptophyta
  -->Class: Equisetopsida
   -->Order: Ranunculales
    -->Family: Ranunculaceae
     -->Genus: Thalictrum
      -->Species: Thalictrum simplex
(20) Berberis dubia Unknown
Chineses Pinyin ZhiYiXiaoBo
Use Part Root Cortex, Endothelium
Habitat GanSu, NingXia, QingHai, NeiMengGu
Species
>Kingdom: Viridiplantae
 -->Phylum: Streptophyta
  -->Class: Equisetopsida
   -->Order: Ranunculales
    -->Family: Berberidaceae
     -->Genus: Berberis
      -->Species: Berberis dubia
(21) Phellodendron amurense Cold
Chineses Pinyin HuangBai
Use Part Bark
Habitat HeiLongJiang, JiLin, LiaoNing, BeiJing, TianJin, HeBei, ShanXi, NeiMengGu, ShanDong, JiangSu, ZheJiang
Flavor Bitter
Meridian Tropism Bladder; Large Intestine; Kidney
Species
>Kingdom: Viridiplantae
 -->Phylum: Streptophyta
  -->Class: Equisetopsida
   -->Order: Sapindales
    -->Family: Rutaceae
     -->Genus: Phellodendron
      -->Species: Phellodendron amurense
03. Combinatorial Therapeutic Effect(s)
Synergistic Effect
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Drug(s) whose efficacy can be enhanced by this phytochemical
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Combination Pair ID: 28
Pair Name Berbamine, Aspirin
Partner Name Aspirin
Disease Info [ICD-11: 2C12] Hepatocellular carcinoma Investigative
Gene Regulation Down-regulation Phosphorylation ATF1 hsa466
Down-regulation Expression CCND1 hsa595
Down-regulation Expression CIP2A hsa57650
Down-regulation Phosphorylation CREB1 hsa1385
In Vitro Model Hep-G2 Hepatoblastoma Homo sapiens (Human) CVCL_0027
Hep 3B2.1-7 Childhood hepatocellular carcinoma Homo sapiens (Human) CVCL_0326
In Vivo Model HepG2 cells (4×10⁶ in 125 μL PBS) were subcutaneously injected into 5-week-old BALB/c nude mice.
Result These data demonstrate that the regulation of cAMP-PKA-CREB/ATF1 signaling represents a noncanonical function of CPS1. Targeting the PKA-CREB/ATF1 axis may be a strategy to improve the therapeutic effects of aspirin on HCC.
Combination Pair ID: 29
Pair Name Berbamine, Sorafenib
Partner Name Sorafenib
Disease Info [ICD-11: 2C12] Hepatocellular carcinoma Investigative
Biological Phenomena Induction-->Apoptosis
Gene Regulation Down-regulation Expression BCL2 hsa596
Up-regulation Cleavage CASP3 hsa836
Down-regulation Expression CCND1 hsa595
Down-regulation Expression CDK4 hsa1019
Down-regulation Expression CDK6 hsa1021
Up-regulation Cleavage PARP1 hsa142
Down-regulation Phosphorylation RB1 hsa5925
Down-regulation Phosphorylation STAT3 hsa6774
In Vitro Model HCCLM3 Adult hepatocellular carcinoma Homo sapiens (Human) CVCL_6832
L-02 Papillomavirus-related cervical adenocarcinoma Homo sapiens (Human) CVCL_6926
Result These findings identify a new type of natural STAT3 inhibitor and provide a novel approach to the enhancement of SORA efficacy by blocking the activation of STAT3.
Combination Pair ID: 30
Pair Name Berbamine, Sorafenib
Partner Name Sorafenib
Disease Info [ICD-11: 2C12] Hepatocellular carcinoma Investigative
Biological Phenomena Target-->Na(+)/K(+)-ATPase
Gene Regulation Up-regulation Cleavage CASP3 hsa836
Down-regulation Expression CCND1 hsa595
Up-regulation Phosphorylation EGFR hsa1956
Up-regulation Phosphorylation IGF1R hsa3480
Up-regulation Phosphorylation MAPK1 hsa5594
Up-regulation Phosphorylation MAPK14 hsa1432
Down-regulation Expression MCL1 hsa4170
Down-regulation Expression MYC hsa4609
Up-regulation Cleavage PARP1 hsa142
Up-regulation Phosphorylation SRC hsa6714
In Vitro Model Hep-G2 Hepatoblastoma Homo sapiens (Human) CVCL_0027
SK-HEP-1 Liver and intrahepatic bile duct epithelial neoplasm Homo sapiens (Human) CVCL_0525
In Vivo Model 5×10⁶ HepG2 cells in 200 μl PBS were subcutaneously injected into the mice at 6 weeks of age.
Result Targeting Na+/K+-ATPase by berbamine and ouabain synergizes with sorafenib to inhibit hepatocellular carcinoma
Combination Pair ID: 31
Pair Name Berbamine, Arcyriaflavin A
Partner Name Arcyriaflavin A
Disease Info [ICD-11: 2A00] Glioblastoma multiforme Investigative
Biological Phenomena Induction-->Apoptosis
Gene Regulation Down-regulation Phosphorylation AKT1 hsa207
Down-regulation Expression ALDH1A1 hsa216
Down-regulation Phosphorylation CAMK1G hsa57172
Up-regulation Cleavage CASP3 hsa836
Up-regulation Cleavage CASP9 hsa842
Down-regulation Expression CCNA2 hsa890
Down-regulation Expression CCNB1 hsa891
Down-regulation Expression CCND1 hsa595
Down-regulation Expression CCNE1 hsa898
Down-regulation Expression CDK1 hsa983
Down-regulation Expression CDK2 hsa1017
Down-regulation Expression CDK4 hsa1019
Up-regulation Expression CDKN1A hsa1026
Down-regulation Expression ITGA6 hsa3655
Down-regulation Phosphorylation MAPK1 hsa5594
Down-regulation Expression NANOG hsa79923
Up-regulation Cleavage PARP1 hsa142
Down-regulation Expression POU5F1 hsa5460
Down-regulation Expression PROM1 hsa8842
Down-regulation Expression SOX2 hsa6657
Down-regulation Phosphorylation STAT3 hsa6774
Up-regulation Expression TP53 hsa7157
In Vitro Model U-87MG ATCC Glioblastoma Homo sapiens (Human) CVCL_0022
C6 Rat malignant glioma Rattus norvegicus (Rat) CVCL_0194
In Vivo Model U87MG-derived GSCs (2×10⁶ cells/egg) were mixed with ECM gel (40 μL/egg) in the absence or presence of the compounds (5 μg/egg) and placed onto the CAM (8 eggs per group).
Result Our findings suggest that a novel combination therapy involving berbamine and ArcA could effectively eradicate glioblastoma stem-like cells.
Combination Pair ID: 621
Pair Name Berbamine, Cisplatin
Partner Name Cisplatin
Disease Info [ICD-11: 2B91] Colorectal cancer Investigative
Biological Phenomena Induction-->Necroptosis
Gene Regulation Up-regulation Cleavage CASP3 hsa836
Up-regulation Cleavage CASP8 hsa841
Up-regulation Phosphorylation MLKL hsa197259
Up-regulation Phosphorylation RIPK3 hsa11035
In Vitro Model OVCAR-3 High grade ovarian serous adenocarcinoma Homo sapiens (Human) CVCL_0465
Result This study proposed that the combination therapy of BBR and DDP markedly enhanced more ovarian cancer cell death by inducing apoptosis and necroptosis, which may improve the anticancer effect of chemotherapy drugs. The apoptosis involved the caspase-dependent pathway, while the necroptosis involved the activation of the RIPK3-MLKL pathway. We hope our findings might provide a new insight for the potential of BBR as a therapeutic agent in the treatment of ovarian cancer.
Combination Pair ID: 972
Pair Name Berbamine, Cisplatin
Partner Name Cisplatin
Disease Info [ICD-11: 2C25] Lung cancer Investigative
Biological Phenomena Induction-->Apoptosis
Gene Regulation Up-regulation Expression BAX hsa581
Down-regulation Expression BCL2 hsa596
Up-regulation Cleavage CASP3 hsa836
Up-regulation Expression CYCS hsa54205
Up-regulation Expression MAP1LC3A hsa84557
Up-regulation Expression MAP1LC3B hsa81631
Up-regulation Phosphorylation MAPK14 hsa1432
Up-regulation Phosphorylation MAPK8 hsa5599
Up-regulation Cleavage PARP1 hsa142
Up-regulation Expression SQSTM1 hsa8878
In Vitro Model NCI-H1299 Lung large cell carcinoma Homo sapiens (Human) CVCL_0060
NCI-H1975 Lung adenocarcinoma Homo sapiens (Human) CVCL_1511
In Vivo Model Cells were injected into the axilla of nude mice at the amount of 5×10⁷ cells/nude mice, and the tumor formation of the transplanted tumor was observed and measured daily.
Result These findings indicate that Ber might be a promising adjuvant for enhancing the cancer cell killing effect of chemotherapy via the inhibition of autophagy. In this process, Nox2 might be a significant mediator of Ber-induced aberrant lysosomal acidification.
04. Reference
No. Title Href
1 Blockade of AMPK-Mediated cAMP-PKA-CREB/ATF1 Signaling Synergizes with Aspirin to Inhibit Hepatocellular Carcinoma. Cancers (Basel). 2021 Apr 6;13(7):1738. doi: 10.3390/cancers13071738. Click
2 Berbamine (BBM), a Natural STAT3 Inhibitor, Synergistically Enhances the Antigrowth and Proapoptotic Effects of Sorafenib on Hepatocellular Carcinoma Cells. ACS Omega. 2020 Sep 18;5(38):24838-24847. doi: 10.1021/acsomega.0c03527. Click
3 Targeting Na+ /K+ -ATPase by berbamine and ouabain synergizes with sorafenib to inhibit hepatocellular carcinoma. Br J Pharmacol. 2021 Nov;178(21):4389-4407. doi: 10.1111/bph.15616. Click
4 Synergistic Anticancer Effect of a Combination of Berbamine and Arcyriaflavin A against Glioblastoma Stem-like Cells. Molecules. 2022 Nov 17;27(22):7968. doi: 10.3390/molecules27227968. Click
5 Berberine in combination with cisplatin induces necroptosis and apoptosis in ovarian cancer cells. Biol Res. 2019 Jul 18;52(1):37. doi: 10.1186/s40659-019-0243-6. Click
6 Berbamine Hydrochloride inhibits lysosomal acidification by activating Nox2 to potentiate chemotherapy-induced apoptosis via the ROS-MAPK pathway in human lung carcinoma cells. Cell Biol Toxicol. 2023 Aug;39(4):1297-1317. doi: 10.1007/s10565-022-09756-8. Click
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