NPs Basic Information

Name
5-Hydroxy-11-propyl-12-oxa-16,17-dithia-2,20-diazabicyclo[12.4.2]icosane-3,13,19-trione
Molecular Formula C18H30N2O5S2
IUPAC Name*
5-hydroxy-11-propyl-12-oxa-16,17-dithia-2,20-diazabicyclo[12.4.2]icosane-3,13,19-trione
SMILES
CCCC1CCCCCC(CC(=O)NC2CSSCC(C(=O)O1)NC2=O)O
InChI
InChI=1S/C18H30N2O5S2/c1-2-6-13-8-5-3-4-7-12(21)9-16(22)19-14-10-26-27-11-15(18(24)25-13)20-17(14)23/h12-15,21H,2-11H2,1H3,(H,19,22)(H,20,23)
InChIKey
MVEXFNFRQDFJIE-UHFFFAOYSA-N
Synonyms
SCHEMBL10042784; PM181110; PM-181110
CAS NA
PubChem CID 56650334
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic acids and derivat
      • Class: Peptidomimetics
        • Subclass: Depsipeptides
          • Direct Parent: Cyclic depsipeptides

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 418.6 ALogp: 1.7
HBD: 3 HBA: 7
Rotatable Bonds: 2 Lipinski's rule of five: Accepted
Polar Surface Area: 155.0 Aromatic Rings: 2
Heavy Atoms: 27 QED Weighted: 0.467

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.333 MDCK Permeability: 0.00001550
Pgp-inhibitor: 0.687 Pgp-substrate: 0.401
Human Intestinal Absorption (HIA): 0.697 20% Bioavailability (F20%): 0.623
30% Bioavailability (F30%): 0.474

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.484 Plasma Protein Binding (PPB): 36.60%
Volume Distribution (VD): 0.469 Fu: 50.64%

ADMET: Metabolism

CYP1A2-inhibitor: 0.007 CYP1A2-substrate: 0.111
CYP2C19-inhibitor: 0.094 CYP2C19-substrate: 0.349
CYP2C9-inhibitor: 0.107 CYP2C9-substrate: 0.447
CYP2D6-inhibitor: 0.007 CYP2D6-substrate: 0.141
CYP3A4-inhibitor: 0.149 CYP3A4-substrate: 0.295

ADMET: Excretion

Clearance (CL): 9.268 Half-life (T1/2): 0.859

ADMET: Toxicity

hERG Blockers: 0.036 Human Hepatotoxicity (H-HT): 0.11
Drug-inuced Liver Injury (DILI): 0.036 AMES Toxicity: 0.347
Rat Oral Acute Toxicity: 0.267 Maximum Recommended Daily Dose: 0.699
Skin Sensitization: 0.716 Carcinogencity: 0.131
Eye Corrosion: 0.003 Eye Irritation: 0.011
Respiratory Toxicity: 0.518
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003186 0.346 D0L7LC 0.289
ENC006036 0.346 D03WAJ 0.223
ENC004295 0.315 D04URO 0.221
ENC002181 0.312 D07GRH 0.216
ENC002164 0.312 D0K0EK 0.216
ENC002063 0.304 D0U0XD 0.203
ENC004419 0.302 D0L9ZR 0.202
ENC003175 0.298 D0K7HU 0.201
ENC005469 0.298 D0W2EK 0.197
ENC003404 0.286 D0K5WS 0.194
*Note: the compound similarity was calculated by RDKIT.